Dynamics of nuclear matrix attachment regions during 5th instar posterior silk gland development in Bombyx mori

Table 3 MAR-Associated features. The MAR associated motifs were identified in the SG 1, SG 5, and SG 7 datasets using RSAT. The number of times the signal is detected for these motifs in each dataset is shown

S. No.	Motif Name	Motif Index	Sequence	SG 1	SG 5	SG 7
1	ORI Signal	m₁	ATTA	12611	40445	48448
2	ORI Signal	m₂	ATTTA	4934	16748	18480
3	ORI Signal	m₃	ATTTTA	1670	5082	5623
4	TG Rich Signal	m₄	TGTTTTG	75	307	386
5	TG Rich Signal	m₅	TGTTTTTTG	37	48	36
6	TG Rich Signal	m₆	TTTTGGGG	9	18	81
7	Curved DNA Signal	m₇	AAAAn₇AAAAn₇AAAA	75	183	90
8	Curved DNA Signal	m₈	TTTTn₇TTTTn₇TTTT	75	183	90
9	Curved DNA Signal	m₉	TTTAAA	1161	4194	4202
10	Kinked DNA Signal	m₁₀	Tan₃TGn₃CA	107	262	847
11	Kinked DNA Signal	m₁₁	TAn₃CAn₃TG	589	694	3796
12	Kinked DNA Signal	m₁₂	TGn₃TAn₃CA	72	160	215
13	Kinked DNA Signal	m₁₃	TGn₃ CA n₃TA	107	262	847
14	Kinked DNA Signal	m₁₄	CA n₃TAn₃TG	111	470	468
15	Kinked DNA Signal	m₁₅	CA n₃TGn₃TA	589	694	3796
16	mtopo-II Signal	m₁₆	RnYnnCnnGYnGKTnYnY	18	27	97
17	dtopo-II Signal	m₁₇	GTnWAYATTnATnnR	11	30	30
18	AT Rich Signal	m₁₈	WWWWWW	22009	37915	77404
19	MRS	MRS		160	560	640

ISSN: 1471-2164