Evaluation Criterium | Chen et al. 2018 [57] | Huh et al. 2018 [58] | Kelley 2020 [59] | Minnoye et al. 2020 [60] | This Paper |
---|---|---|---|---|---|
Evaluation on Genomic Regions not Used in Training | ✓ | ✓ | ✓ | ✓ | ✓ |
Evaluation on Species not Used in Training | ✓ | ✓ | ✓ | ✘ | ✓ |
Comparison of Model Trained on One Species to Model Trained on Multiple Species | ✘ | ✓ | ✓ | ✘ | ✓ |
Evaluation of Lineage-Specific Enhancer Accuracy | ✘ | ✘ | ✘ | ✘ | ✓ |
Evaluation of Tissue-Specific Enhancer Accuracy | ✘ | ✘ | ✘ | ✘ | ✓ |
Evaluation of Phylogeny-Matching Correlations | ✘ | ✘ | ✘ | ✘ | ✓ |
Comparison to Conservation Scores | ✘ | ✘ | ✘ | ✘ | ✓ |
Identification of Biologically Relevant Enhancers with Correctly Predicted Lineage-Specificity | ✘ | ✘ | ✘ | ✓ | ✓ |