Table 1 Basic characteristics of the plastomes generated in this study
From: Comparative plastome analysis of Musaceae and new insights into phylogenetic relationships
Species | Size (bp) | LSC (bp) | SSC (bp) | IR (bp) | GC content(%) | Number of genes | PCG | tRNA | rRNA | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Total | Coding | Non-coding | LSC | SSC | IR | |||||||||
E. glaucum | 168,248 | 87,832 | 11,144 | 34,636 | 37.1 | 37.4 | 36.7 | 35.5 | 31.3 | 40.0 | 135 | 89 | 38 | 8 |
E. livingstonianum | 168,258 | 88,099 | 11,123 | 34,506 | 37.1 | 37.5 | 36.6 | 35.4 | 31.5 | 40.0 | 135 | 89 | 38 | 8 |
E. superbum | 168,332 | 88,190 | 11,048 | 34,547 | 37.0 | 37.5 | 36.4 | 35.3 | 31.3 | 40.0 | 135 | 89 | 38 | 8 |
E. ventricosum | 168,411 | 88,620 | 11,075 | 34,358 | 37.1 | 37.5 | 36.6 | 35.4 | 31.5 | 40.2 | 135 | 89 | 38 | 8 |
M. acuminata subsp. banksii | 169,808 | 88,413 | 10,761 | 35,317 | 36.9 | 37.4 | 36.3 | 35.2 | 31.3 | 39.8 | 136 | 90 | 38 | 8 |
M. acuminata subsp. burmannica | 169,795 | 88,293 | 10,750 | 35,376 | 36.9 | 37.3 | 36.5 | 35.4 | 31.4 | 39.7 | 136 | 90 | 38 | 8 |
M. acuminata subsp. halabanensis | 169,658 | 88,617 | 11,059 | 34,991 | 36.9 | 37.4 | 36.3 | 35.2 | 31.3 | 39.9 | 136 | 90 | 38 | 8 |
M. acuminata subsp. microcarpa | 170,081 | 88,853 | 10,772 | 35,228 | 36.8 | 37.4 | 36.2 | 35.1 | 31.2 | 39.8 | 136 | 90 | 38 | 8 |
M. acuminata subsp. truncata | 170,137 | 88,747 | 10,772 | 35,309 | 36.9 | 37.4 | 36.3 | 35.2 | 31.3 | 39.8 | 136 | 90 | 38 | 8 |
M. acuminata subsp. zebrina | 169,873 | 88,437 | 10,734 | 35,338 | 36.9 | 37.4 | 36.3 | 35.3 | 31.2 | 39.7 | 136 | 90 | 38 | 8 |
M. aurantiaca | 170,058 | 88,429 | 10,815 | 35,407 | 36.9 | 37.4 | 36.3 | 35.3 | 31.2 | 39.7 | 136 | 90 | 38 | 8 |
M. barioensis | 168,559 | 88,478 | 11,021 | 34,530 | 36.8 | 37.3 | 36.3 | 35.2 | 31.2 | 39.9 | 135 | 89 | 38 | 8 |
M. basjoo | 171,853 | 89,746 | 11,739 | 35,184 | 36.5 | 37.3 | 35.6 | 34.8 | 30.2 | 39.7 | 136 | 90 | 38 | 8 |
M. beccarii | 168,209 | 88,164 | 11,055 | 34,495 | 36.8 | 37.3 | 36.4 | 35.2 | 31.1 | 39.9 | 135 | 89 | 38 | 8 |
M. borneensis | 168,703 | 88,459 | 11,044 | 34,600 | 36.8 | 37.3 | 36.3 | 35.1 | 31.2 | 39.8 | 135 | 89 | 38 | 8 |
M. cheesmanii | 170,714 | 88,526 | 11,636 | 35,276 | 36.7 | 37.4 | 36.1 | 35.2 | 30.7 | 39.7 | 136 | 90 | 38 | 8 |
M. chunii | 169,309 | 88,054 | 10,599 | 35,328 | 37.0 | 37.6 | 36.4 | 35.4 | 31.6 | 39.8 | 136 | 90 | 38 | 8 |
M. coccinea | 166,826 | 87,932 | 10,439 | 34,129 | 37.1 | 37.4 | 36.9 | 35.5 | 31.6 | 40.1 | 134 | 89 | 38 | 8 |
M. gracilis | 166,782 | 87,118 | 11,694 | 33,985 | 37.0 | 37.3 | 36.7 | 35.4 | 31.3 | 40.1 | 135 | 89 | 38 | 8 |
M. ingens | 168,249 | 88,319 | 10,854 | 34,538 | 36.8 | 37.2 | 36.4 | 35.1 | 31.0 | 39.9 | 135 | 89 | 38 | 8 |
M. jackeyi | 167,693 | 88,350 | 11,049 | 34,147 | 36.9 | 37.3 | 36.4 | 35.1 | 31.1 | 40.0 | 135 | 89 | 38 | 8 |
M. johnsii | 167,331 | 87,549 | 11,008 | 34,387 | 37.0 | 37.4 | 36.6 | 35.4 | 31.2 | 40.0 | 135 | 89 | 38 | 8 |
M. laterita | 170,143 | 88,746 | 10,773 | 35,312 | 36.8 | 37.4 | 36.3 | 35.2 | 31.2 | 39.8 | 136 | 90 | 38 | 8 |
M. lokok | 166,902 | 86,881 | 11,087 | 34,467 | 37.0 | 37.3 | 36.7 | 35.4 | 31.2 | 39.9 | 135 | 89 | 38 | 8 |
M. lolodensis | 168,542 | 88,330 | 11,060 | 34,576 | 36.8 | 37.3 | 36.3 | 35.2 | 31.1 | 39.9 | 135 | 89 | 38 | 8 |
M. maclayi subsp. maclayi | 167,586 | 88,243 | 11,049 | 34,147 | 36.9 | 37.3 | 36.4 | 35.2 | 31.1 | 40.0 | 135 | 89 | 38 | 8 |
M. mannii | 170,636 | 88,883 | 10,815 | 35,469 | 36.8 | 37.4 | 36.1 | 35.1 | 31.2 | 39.7 | 136 | 90 | 38 | 8 |
M. nagensium | 169,758 | 88,418 | 11,082 | 35,129 | 36.7 | 37.3 | 36.0 | 35.0 | 30.8 | 39.8 | 136 | 90 | 38 | 8 |
M. ornata | 169,896 | 88,673 | 10,851 | 35,186 | 36.8 | 37.4 | 36.2 | 35.1 | 31.1 | 39.9 | 136 | 90 | 38 | 8 |
M. paracoccinea J52 | 167,287 | 88,225 | 10,557 | 34,246 | 37.1 | 37.4 | 36.8 | 35.4 | 31.4 | 40.1 | 135 | 89 | 38 | 8 |
M. paracoccinea LSY001 | 167,601 | 88,304 | 10,589 | 34,354 | 37.0 | 37.3 | 36.6 | 35.2 | 31.2 | 40.1 | 135 | 89 | 38 | 8 |
M. peekelii subsp. angustigemma | 167,660 | 88,282 | 11,084 | 34,147 | 36.9 | 37.3 | 36.4 | 35.1 | 31.1 | 40.0 | 135 | 89 | 38 | 8 |
M. puspanjaliae | 171,298 | 89,386 | 11,476 | 35,218 | 36.6 | 37.3 | 35.9 | 35.0 | 30.4 | 39.7 | 136 | 90 | 38 | 8 |
M. rosea | 168,495 | 87,364 | 10,541 | 35,295 | 37.1 | 37.4 | 36.7 | 35.5 | 31.7 | 39.8 | 136 | 90 | 38 | 8 |
M. rubinea | 172,514 | 89,995 | 11,767 | 35,376 | 36.5 | 37.3 | 35.6 | 34.8 | 30.1 | 39.6 | 136 | 90 | 38 | 8 |
M. rubra | 169,309 | 88,128 | 10,773 | 35,204 | 37.0 | 37.4 | 36.5 | 35.4 | 31.2 | 39.9 | 136 | 90 | 38 | 8 |
M. ruiliensis | 167,806 | 86,945 | 10,413 | 35,224 | 37.1 | 37.4 | 36.9 | 35.6 | 31.9 | 39.9 | 136 | 90 | 38 | 8 |
M. salaccensis | 167,018 | 87,262 | 11,112 | 34,322 | 37.0 | 37.4 | 36.6 | 35.4 | 31.1 | 40.0 | 135 | 89 | 38 | 8 |
M. sanguinea | 170,502 | 89,201 | 10,943 | 35,179 | 36.8 | 37.4 | 36.1 | 35.1 | 30.9 | 39.8 | 136 | 90 | 38 | 8 |
M. schizocarpa | 169,821 | 88,707 | 10,714 | 35,200 | 36.9 | 37.4 | 36.4 | 35.2 | 31.7 | 39.8 | 136 | 90 | 38 | 8 |
M. siamensis | 170,101 | 88,718 | 10,793 | 35,295 | 36.9 | 37.4 | 36.3 | 35.2 | 31.2 | 39.8 | 136 | 90 | 38 | 8 |
M. tonkinensis | 170,100 | 88,926 | 10,962 | 35,106 | 36.8 | 37.3 | 36.3 | 35.1 | 31.3 | 39.8 | 136 | 90 | 38 | 8 |
M. troglodytarum | 167,929 | 88,532 | 11,049 | 34,174 | 36.8 | 37.3 | 36.4 | 35.1 | 31.1 | 40.0 | 135 | 89 | 38 | 8 |
M. velutina | 169,791 | 89,392 | 11,067 | 34,666 | 36.8 | 37.4 | 36.2 | 35.1 | 31.1 | 39.9 | 135 | 89 | 38 | 8 |
M. yunnanensis | 170,086 | 88,940 | 11,072 | 35,037 | 36.7 | 37.2 | 36.2 | 35.1 | 31.1 | 39.7 | 136 | 90 | 38 | 8 |