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Table 5 Enriched Gene Ontology Terms when Comparing N2 and CB4856 Worms fed OP50 versus S. epidermidis

From: Wild-type Caenorhabditis elegans isolates exhibit distinct gene expression profiles in response to microbial infection

 

Gene Ontology Term

Number of Genes

Percenta

FDR-adjusted p-valueb

Genes expressed exclusively in worms fed S. epidermidis

Signaling: phosphatase

33

16.8

7.3x10-14

Cytoskeleton: microtubule

24

18.8

6.3x10-11

Major sperm protein

12

38.7

3.3x10-8

Signaling: tyrosine kinase

12

16.0

1.4x10-4

Protein modification: carbohydrate

15

11.8

2.4x10-4

Stress response: C-type Lectin

20

7.8

2.1x10-3

Genes expressed in opposing directions in worms fed E. coli OP50 or S. epidermidis

Extracellular material: collagen

7

3.8

4.5x10-8

Stress response: pathogen

4

2.3

6.8x10-4

  1. aPercentage of genes annotated with the indicated GO term that are differentially expressed
  2. bFDR-adjusted p-value is a measure of enrichment (Fisher exact test; Bonferroni Correction) of the GO term among differentially expressed genes