Fig. 6

Ingenuity pathway core analysis (IPA) of prolonged storage (NSR) and control (CR) groups. Ingenuity® Pathway Analysis (Qiagen, Valencia, CA) was used to analyze differentially expressed genes (DEGs) to biologically interpret expression data. Copyright permission from Qiagen has been obtained for use of the images presented. (A) The top network obtained through pathway analysis of DEGs between prolonged storage (NSR) and control (CR) groups (network score = 42, top functions = cell cycle, cellular assembly and organization, DNA replication, recombination, and repair) (FPKM > 20, p-value < 0.05, |fold change| > 1.5). (B) The top regulator effects network obtained through pathway analysis of DEGs between NSR and CR groups (consistency score = 13) (FPKM > 20, p-value < 0.05, |fold change| > 1.5)