Integrative analysis of circRNA, miRNA, and mRNA profiles to reveal ceRNA regulation in chicken muscle development from the embryonic to post-hatching periods

Table 1 Summary of sequencing results in chicken breast muscle at six stages

Sample	Raw Read	Valid Read	Valid Ratio (%)	Q20 (%)	Q30 (%)	GC content (%)
E12_1	79,361,516	78,494,064	98.91	99.59	95.12	61.50
E12_2	70,330,506	69,323,190	98.57	99.33	94.31	61.00
E12_3	71,844,158	70,861,754	98.63	99.49	94.80	59.50
E17_1	91,378,212	90,116,164	98.62	99.55	94.98	63.50
E17_2	76,521,826	75,503,870	98.67	99.42	94.47	63.00
E17_3	74,165,582	72,949,882	98.36	99.56	94.99	62.50
D1_1	75,095,908	74,183,634	98.79	99.26	94.35	61.00
D1_2	73,852,734	72,432,066	98.08	99.55	94.91	60.50
D1_3	80,960,850	79,890,708	98.68	99.55	95.03	61.50
D14_1	67,738,396	67,005,658	98.92	99.67	95.74	51.00
D14_2	67,411,076	65,705,194	97.47	99.59	96.61	50.50
D14_3	65,436,016	63,721,900	97.38	99.60	96.31	50.00
D56_1	67,920,060	66,227,126	97.51	99.56	96.46	49.00
D56_2	73,784,802	72,771,396	98.63	99.63	95.70	47.50
D56_3	67,654,772	66,716,740	98.61	99.62	95.16	50.00
D98_1	68,319,518	65,730,624	96.21	99.55	96.62	49.00
D98_2	71,561,460	70,704,572	98.80	99.74	95.58	51.00
D98_3	67,326,310	64,822,898	96.28	120.72	116.80	51.00
Total	1,310,663,702	1,287,161,440				55.72%

ISSN: 1471-2164