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Fig. 4 | BMC Genomics

Fig. 4

From: Genome-wide identification of associations between enhancer and alternative splicing in human and mouse

Fig. 4

 A real case for the enhancer-AS association. The associated enhancers located in upstream of human gene ST3GAL4 (A) and mouse gene St3gal4 (B) marked by the red arrows. The tracks showing ENCODE cis-regulatory elements and genomic synteny between human and mouse are provided in the below. C The sashimi plots and PSI histograms of human ST3GAL4 2nd skipped exon (SE) event in 17 samples. The plots in red indicate that the samples having present associated enhancer chr11_1460, while the plots in green indicating the absence of chr11_1460. D The VEnAS result of 2nd SE event in ENSG00000110080 and associated enhancer chr11_1460. The location of enhancer indicated by red triangle in genomic architecture, association plot, and two-by-two contingency table are provided

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BMC Genomics

ISSN: 1471-2164

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