From: Comparison of SARS-CoV-2 sequencing using the ONT GridION and the Illumina MiSeq
 | Run116 | |
---|---|---|
 | MiSeq | GridION |
Runtime (hrs.) | 36 | 21 |
No. of samples sequenced | 93 | 93 |
Data obtained | 7246.3 MB | 1999,4 MB |
Consensus genomes | 93 | 93 |
Average coverage (X) | 94.34% | 72.96% |
Passing GISAID QC (> + 80%) | 83 (89.2%) | 29 (27.9%) |
Clusters passing QC | 70% | – |
Q30 score | 73.1% | – |
Pores on flowcell | – | 1012 pores |