Fig. 4
From: SCSilicon: a tool for synthetic single-cell DNA sequencing data generation
Benchmarking of single-cell CNV Caller for CNV dataset1. A-E CNV Heatmap of noisy ground-truth, AneuFinder, SCOPE, SCYN, and clean ground-truth, respectively. The column and row represents the genome region bin and single cell, respectively. The value of the heatmap indicates the copy number, with blue, white, and red stands for copy number less than, equal to, and larger than 2, respectively. F-H Scatter plot and Pearson correlation between clean ground-truth CNV and estimated CNV of AneuFinder, SCOPE, and SCYN, respectively. I-K The CNV calling accuracy on loss, neutral, and gain bins, respectively