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Table 3 Genome distribution of variants (SNPs and InDels)

From: A large-scale population based organelle pan-genomes construction and phylogeny analysis reveal the genetic diversity and the evolutionary origins of chloroplast and mitochondrion in Brassica napus L.

Region

Cp Variant

Mt Variant

downstream/upstream

1,279

147

exonic

 synonymous / nonframeshift

427

64

 nonsynonymous / frameshift

322

76

 stopgain

5

1

 stoploss

1

1

 unknown

0

10

intergenic

0

26

intronic

369

8

splicing

0

1

ncRNA_exonic

4

1

Total a

2,407

335

  1. a Total number here was larger than described above because several locus had multiple variants
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BMC Genomics

ISSN: 1471-2164

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