Fig. 3
From: Characterising genome architectures using genome decomposition analysis
Detailed view of Plasmodium falciparum chromosome 4. A A selection of the features used as input to GDA displayed across the 1.2Mbp chromosome 4. These features were identified as significant in one or more clusters of one or more GDA runs. Data range indicates minimum and maximum values for the y axis of each feature. B Chromosome architectures generated using different feature sets with comparison to the definition of Otto et al. which captures only the core [21]. GDA was run with basic sequence features, with the addition of gene annotation, with gene annotations and complex repeat finding, with gene annotations, complex repeat finding and orthology analysis