Table 2 Credible set improvements
From: TSABL: Trait Specific Annotation Based Locus predictor
Trait | Maximum number of SNPs per locus | Average number of SNPs per locus | Number of loci with a credible set | Number of loci with a multi-SNP credible set | Fraction of loci with prioritized SNPS at FDR < 0.25 | Fraction of loci with prioritized SNPS at FDR < 0.10 |
|---|---|---|---|---|---|---|
autoimmune | 108 | 18 | 237 | 218 | 0.48 | 0.29 |
platelets | 86 | 11 | 951 | 692 | 0.54 | 0.24 |
RBC | 209 | 12 | 789 | 615 | 0.52 | 0.27 |
WBC | 197 | 13 | 762 | 583 | 0.50 | 0.31 |