Comparative genomics analysis and virulence-related factors in novel Aliarcobacter faecis and Aliarcobacter lanthieri species identified as potential opportunistic pathogens

Table 2 Number of predicted orthologous genes associated with COG functional categories in Aliarcobacter species

COG Category	*A. faecis* AF1078^T	*A. lanthieri* AF1440^T	*A. butzleri* NCTC 12481^T	*A. cryaerophilus* ATCC 43158^T	*A. skirrowii* CCUG 10374^T	*A. trophiarum* LMG 25534^T	Description
A	0	0	0	0	0	0	RNA processing and modification
B	0	0	0	0	0	0	Chromatin structure and dynamics
C	100	90	110	117	119	125	Energy production and conversion
D	18	15	16	30	26	24	Cell cycle control, cell division, chromosome partitioning
E	116	126	139	149	143	145	Amino acid transport and metabolism
F	56	53	57	63	62	62	Nucleotide transport and metabolism
G	41	46	52	63	62	63	Carbohydrate transport and metabolism
H	117	115	108	127	126	122	Coenzyme transport and metabolism
I	49	49	47	63	50	59	Lipid transport and metabolism
J	155	160	161	183	177	177	Translation, ribosomal structure and biogenesis
K	81	78	92	76	77	65	Transcription
L	80	78	71	107	106	87	Replication, recombination and repair
M	123	133	141	167	129	149	Cell wall/membrane/envelope biogenesis
N	33	34	35	56	53	49	Cell motility
O	65	72	76	98	95	100	Posttranslational modification, protein turnover, chaperones
P	118	142	118	107	119	113	Inorganic ion transport and metabolism
Q	9	6	7	13	10	9	Secondary metabolites biosynthesis, transport and catabolism
R	99	100	104	130	128	118	General function prediction only
S	36	29	39	41	51	36	Function unknown
T	133	117	143	185	156	155	Signal transduction mechanisms
U	38	25	22	45	57	44	Intracellular trafficking, secretion, and vesicular transport
V	43	34	41	46	43	36	Defense mechanisms
W	2	2	2	6	4	3	Extracellular structures
X	11	1	7	11	13	31	Mobilome: prophages, transposons
Y	0	0	0	0	0	0	Nuclear structure
Z	2	2	2	3	4	3	Cytoskeleton

ISSN: 1471-2164