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Fig. 4 | BMC Genomics

Fig. 4

From: Comparative genomic analysis of the human genome and six bat genomes using unsupervised machine learning: Mb-level CpG and TFBS islands

Fig. 4

DegeHexa- and TFBS-DegeHexa-BLSOMs for 3 bats and humans and the distribution of the TFBS-DegeHexa frequency on their chromosomes. A DegeHexa-BLSOM for 1-Mb sequences with a 500-kb sliding step for 3 bats and humans and its U-matrix. B TFBS-DegeHexa-BLSOM for humans and its U-matrix. Nodes are displayed as described in Fig. 3C. C TFBS-DegeHexa-BLSOM for 3 bats and its U-matrix. D The occurrence frequencies (%) of the top ten DegeHexa TFBSs on seven human chromosomes is displayed. The common symbols (listed in the last panel) are used, regardless of the chromosome. E The occurrence frequencies (%) of the top ten DegeHexa TFBSs with (w/) or without (w/o) CG on three scaffolds are displayed in the upper and lower panels, respectively. To facilitate the comparison of their peak positions, vertical lines of auxiliary scales are included. The common symbols (listed in the rightmost panel) are used, independent of the scaffold

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BMC Genomics

ISSN: 1471-2164

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