Table 1 Summary of alternative splicing events in the posterior kidney of PKD affected brown trout. The alternative splicing events were identified from the RNA-seq data generated at 12 wpe
Alternatively spliced Event | Over all events | Filtered events │Δ ψ│ > 5% FDR P-value < 0.05 | Increased inclusion alternatively spliced levels | Decreased inclusion alternatively spliced levels |
|---|---|---|---|---|
A3SS | 1528 | 15 | 6 | 9 |
A5SS | 1394 | 8 | 5 | 3 |
SE | 13,390 | 108 | 59 | 49 |
RI | 1815 | 11 | 4 | 7 |
MXE | 1595 | 11 | 3 | 8 |
Total | 19,722 | 153 | 77 | 76 |