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Table 2 List of DEAS genes enriched in the protein-protein interaction network analysis. The inclusion level difference between exposed and control is computed in rMATS

From: Genome-wide alternative splicing profile in the posterior kidney of brown trout (Salmo trutta) during proliferative kidney disease

Sl No

Gene code

Description

Splicing event

Inclusion level difference

Enrichment in protein-protein interaction network

1

ahcyl1

S-adenosylhomocysteine hydrolase-like protein 1

SE

0.165

Mixed inclusion of Ion homeostasis and EF-hand domain cluster (CL:19893)

2

stim1b

Stromal interaction molecule 1b

SE

0.159

Mixed inclusion of Ion homeostasis and EF-hand domain cluster (CL:19893)

3

atp1a3a

ATPase Na+/K+ transporting subunit alpha 3a

RI

0.198

Cation transporting ATPase C-terminus and Sodium/potassium ATPase beta chain cluster (CL:20005);

Mixed inclusion of Ion homeostasis and EF-hand domain cluster (CL:19893)

4

atp1a1a.1

ATPase Na+/K+ transporting subunit alpha 1a tandem duplicate 1

MXE

−0.07

Cation transporting ATPase C-terminus and Sodium/potassium ATPase beta chain cluster (CL:20005);

Mixed inclusion of Ion homeostasis and EF-hand domain cluster (CL:19893)

5

atp1a1a.5

ATPase Na+/K+ transporting subunit alpha 1a tandem duplicate 5

MXE

−0.075

Cation transporting ATPase C-terminus and Sodium/potassium ATPase beta chain cluster (CL:20005);

Mixed inclusion of Ion homeostasis and EF-hand domain cluster (CL:19893)

6

slc8a2a

Solute carrier family 8 member 2a

SE

−0.061

Cation transporting ATPase C-terminus and Sodium/potassium ATPase beta chain cluster (CL:20005);

Mixed inclusion of Ion homeostasis and EF-hand domain cluster (CL:19893)

7

flna

Filamin A alpha

SE

−0.143

Salmonella infection pathway (dre05132)

8

myd88

MYD88 innate immune signal transduction adaptor

SE

−0.058

Salmonella infection pathway (dre05132)

9

mapk12a

Mitogen-activated protein kinase 12a

MXE

0.148

Salmonella infection pathway (dre05132)

10

plekhm2

Pleckstrin homology domain containing family M

SE

0.087

Salmonella infection pathway (dre05132)