Skip to main content

Table 14 Comparison of ACC of different PPIs prediction methods on independent test sets

From: SDNN-PPI: self-attention with deep neural network effect on protein-protein interaction prediction

Methods/Species C.elegans E.coli H.sapiens M.musculus
test pairs 4013 6984 1412 313
DeepPPI[34] 94.84 92.19 93.77 91.37
DeepFE-PPI[39] 100 100 100 100
LightGBM-PPI[27] 90.16 92.16 94.83 94.57
StackPPI[50] 97.11 98.71 97.66 98.40
GcForest-PPI[41] 96.01 96.3 98.58 99.04
GTB-PPI[28] 92.42 94.06 97.38 98.08
AE-LGBM[60] 90.10 92.10 94.80 94.50
SDNN-PPI 100 100 100 100