Table 3 Number and proportion of recombinant molecules mediated by 15 pairs of repeats
Repeat | Length (bp) | Location | Reads support major conformation | Reads support alternative conformation |
|---|---|---|---|---|
LR9 | 15,128 | chr1: 33,099-48,226 | 12 (48.00%) | 13 (52.00%) |
chr1: 115,888-131,015 | ||||
LR11 | 7388 | chr2: 59,291-51,904 | 41 (69.49%) | 18 (30.51%) |
chr2: 174,444-167,057 | ||||
LR12 | 3590 | chr1: 15,290-11,701 | 60 (60.00%) | 40 (40.00%) |
chr1: 242,920-239,331 | ||||
SR1 | 322 | chr1: 16,039-15,718 | 173 (91.05%) | 17 (8.95%) |
chr1: 151,620-151,941 | ||||
SR2 | 298 | chr2: 24,881-25,178 | 183 (98.91%) | 2 (1.08%) |
chr1: 156,132-156,429 | ||||
SR3 | 280 | chr1: 302,985-303,264 | 149 (91.98%) | 13 (8.02%) |
chr1: 340,025-339,746 | ||||
SR4 | 229 | chr2: 107,341-107,569 | 162 (98.18%) | 3 (1.82%) |
chr1: 107,206-106,978 | ||||
SR5 | 207 | chr1: 7671-7465 | 159 (98.15%) | 3 (1.85%) |
chr1: 31,246-31,040 | ||||
SR6 | 204 | chr1: 74,344-74,547 | 162 (99.39%) | 1 (0.61%) |
chr1: 140,695-140,898 | ||||
SR7 | 201 | chr2: 124,380-124,580 | 144 (98.63%) | 2 (1.37%) |
chr1: 14,938-14,738 | ||||
SR8 | 169 | chr2: 80,125-79,957 | 220 (98.21%) | 4 (1.79%) |
chr1: 285,880-286,048 | ||||
SR9 | 146 | chr1: 23,908-24,053 | 193 (97.97%) | 4 (2.03%) |
chr1: 258,829-258,684 | ||||
SR10 | 131 | chr2: 51,068-51,198 | 178 (98.34%) | 3 (1.66%) |
chr2: 79,866-79,996 | ||||
SR11 | 128 | chr1: 255,127-255,254 | 189 (100.00%) | 0 (0.0%) |
chr1: 320,910-321,037 | ||||
SR12 | 125 | chr1: 79,449-79,325 | 207 (99.04%) | 2 (0.96%) |
chr1: 163,440-163,564 |