Table 4 Plastid homologous sequences identified in mitogenome (MTPTs) of A. esculentus
Fragments | Aligned length (bp) | Mitogenome | Plastome | contained genes | ||
|---|---|---|---|---|---|---|
Start | End | Start | End | |||
mtpt12 | 5142 | 32,524 | 27,383 | 101,579 | 106,720 | ndhB-exon1; rps7; rps12-exon2,3; trnV-GAC; rrn16S-fra |
27,383 | 32,524 | 144,473 | 149,614 | |||
mtpt22 | 3833 | 103,040 | 99,223 | 40,982 | 44,814 | psaA; psaB-fra |
mtpt32 | 2039 | 135,795 | 133,757 | 142,208 | 144,246 | trnI-GAU; rrn16S-fra |
133,757 | 135,795 | 106,947 | 108,985 | |||
mtpt42 | 311 | 53,039 | 53,349 | 86,170 | 86,480 | rpl14-fra |
168,192 | 168,502 | 86,170 | 86,480 | |||
mtpt52 | 126 | 100,379 | 100,254 | 41,419 | 41,544 | psaB-fra |
mtpt62 | 126 | 102,603 | 102,478 | 43,643 | 43,768 | psaA-fra |
mtpt72 | 84 | 94,520 | 94,437 | 32,029 | 32,112 | trnD-GUC |
mtpt82 | 82 | 110,099 | 110,018 | 136,381 | 136,461 | trnN-GUU |
110,018 | 110,099 | 114,732 | 114,812 | |||
mtpt92 | 74 | 149,018 | 148,945 | 1 | 74 | trnH-GUG |
mtpt102 | 39 | 29,944 | 29,906 | 46,790 | 46,828 | / |
29,944 | 29,906 | 126,842 | 126,880 | |||
mtpt112 | 36 | 13,796 | 13,761 | 69,098 | 69,133 | / |
mtpt121 | 3114 | 162,783 | 159,670 | 150,223 | 153,335 | ycf2-fra |
159,670 | 162,783 | 97,858 | 100,970 | |||
mtpt131 | 1596 | 217,672 | 216,077 | 140,003 | 141,598 | trnA-UGC-exon2; rrn23S-fra |
216,077 | 217,672 | 109,595 | 111,190 | |||
mtpt141 | 1410 | 50,483 | 49,125 | 68,905 | 70,261 | psbJ; psbL-fra; psbF-fra; psbE-fra |
mtpt151 | 440 | 330,367 | 329,936 | 111,355 | 111,790 | rrn23S-fra |
329,936 | 330,367 | 139,403 | 139,838 | |||
mtpt161 | 447 | 48,748 | 48,339 | 71,113 | 71,558 | trnW-CCA; trnP-UGG |
mtpt171 | 430 | 38,777 | 38,363 | 143,683 | 144,102 | rrn16S-fra |
38,363 | 38,777 | 107,091 | 107,510 | |||
mtpt181 | 430 | 121,566 | 121,152 | 143,683 | 144,102 | rrn16S-fra |
121,152 | 121,566 | 107,091 | 107,510 | |||
mtpt191 | 318 | 38,220 | 37,908 | 144,237 | 144,546 | rrn16S-fra |
37,908 | 38,220 | 106,647 | 106,956 | |||
mtpt201 | 318 | 121,009 | 120,697 | 144,237 | 144,546 | rrn16S-fra |
120,697 | 121,009 | 106,647 | 106,956 | |||
mtpt211 | 153 | 332,554 | 332,706 | 47,948 | 48,089 | trnS-GGA |
mtpt221 | 157 | 57,548 | 57,393 | 37,270 | 37,416 | psbC-fra |
mtpt231 | 126 | 164,006 | 164,129 | 71,090 | 71,212 | trnW-CCA |
mtpt241 | 70 | 297,221 | 297,152 | 113,130 | 113,199 | rrn23S-fra |
297,152 | 297,221 | 137,994 | 138,063 | |||
mtpt251 | 79 | 172,737 | 172,659 | 56,243 | 56,321 | trnM-CAU |
mtpt261 | 73 | 91,588 | 91,516 | 56,249 | 56,321 | trnM-CAU |
mtpt271 | 77 | 243,859 | 243,783 | 91,951 | 92,025 | trnI-CAU |
243,783 | 243,859 | 159,168 | 159,242 | |||
mtpt281 | 30 | 332,703 | 332,674 | 8468 | 8497 | trnS-GCA-fra |