Skip to main content

Table 1 Primer used in qRT-PCR

From: Differential expression profile and in-silico functional analysis of long noncoding RNA and mRNA in duck embryo fibroblasts infected with duck plague virus

DEGs name

Forward (F) or Reverse (R)

Sequence (5’-3’)

MSTRG.7043.1

F

TGGCAGACACTTCAGCACTCT

 

R

GGTAAATCCCTAGTTCAGCAGTCAG

MSTRG.12158.11

F

ACTGTCCTACAAGCGGCGTAA

 

R

CTCGTAGTTCTCTGGCGGATACT

MSTRG.23371.5

F

GTAATCAGCCTCTCAATCACCTTCAC

 

R

TGTCAACCTCCAGCAACTTCTCT

MSTRG.23546.3

F

TGATGACAGGATGAGGAGGAATGG

 

R

GAGCCAATAAGTCACAGAATCACAGA

MSTRG.16184.2

F

AGGAGCCGTTGGATGGTGTAAT

 

R

ATTCACTCTTCTCCACGAGGTAGG

MSTRG.24727.2

F

CTACCACAGCAATGTCTTCCACTACTC

 

R

CAGCATCACAATCACTTACCACAAGGA

ENSAPLG00020017612

F

TTGATATTCGTAAGGACCTGTATGC

(ACTC1)

R

GCGGTGGACAATGGATGGA

ENSAPLG00020011270

F

TCCTCTGCTGCCTCTTCTG

(SRD5A2)

R

GGAGATCGCTGTGAATGTTGA

ENSAPLG00020002523

F

TGAAGATGACGATGAGGAGGAG

(FANCI)

R

TACACCAACACCAGAAGACAGA

ENSAPLG00020012559

F

CTTGGTGATGCTGACGATGGA

(RCC1)

R

TTGTTGCCTCTGCCTCTGAC

ENSAPLG00020016685

F

GCCAAGCCATTCCACCAGAT

(DCN)

R

TGTAAGTCCAGCAGAGTTGTATCAG

ENSAPLG00020004383

F

CTGCGACGAGATGAACGACAT

(SFRP2)

R

AGAGCCGAAGCCACTAACACT

β-actin

F

TTCCAGCCATCTTTCTTGGGTA

 

R

AGCGTTTACAACCTAACACCA