Skip to main content

Table 4 Differentially expressed chemokines and their chemotactic activities. TND = transcript not detected

From: Transcriptome profile of spleen tissues from locally-adapted Kenyan pigs (Sus scrofa) experimentally infected with three varying doses of a highly virulent African swine fever virus genotype IX isolate: Ken12/busia.1 (ken-1033)

Chemokine

Key immune function

Differential expression in High dose

Differential expression in medium dose

Differential expression in Low dose

Chemotactic activity

log2 Fold Change

padj

log2 Fold Change

padj

log2 Fold Change

padj

CCL2

Inflammatory monocyte trafficking

4.03

3.76E-10

4.11

1.12E-08

TND

TND

Classical monocyte, Natural killer cells

CCL4

Macrophage and natural killer cell migration; T cell–dendritic cell interactions

1.69

2.30E-02

TND

TND

TND

TND

Nonclassical-Monocyte, Natural killer cells

CCL21

T cell and dendritic cell homing to lymph node

TND

TND

−4.30

6.14E-04

  

Neutrophils, CD8+ T cells, dendritic cells

CCL26

Eosinophil and basophil migration

−5.28

2.51E-04

−4.17

3.45E-03

TND

TND

Th2 type T lymphocytes

CXCL2

Neutrophil trafficking

3.44

9.55E-06

2.68

1.70E-03

TND

TND

Neutrophils, CD8+ T cells, monocytes/macrophage, natural killer cells

CXCL8

Neutrophil trafficking

TND

TND

2.42

1.22E-02

TND

TND

Neutrophils, CD8+ effector T cells, monocytes/macrophage, natural killer cells

CXCL10

Th1 response; Th1, CD8, NK trafficking

1.62

8.29E-03

2.85

4.93E-05

−2.56

1.61E-03

CD8+ T cells, T helper cells (Th1), natural killer cells

CXCL13

B cell and follicular helper (Tfh) cell positioning in lymph node

−2.52

2.35E-03

−1.67

4.13E-02

TND

TND

B cells