Fig. 2
From: Genomic surveillance of Rift Valley fever virus: from sequencing to lineage assignment
Screenshot of the web interface for RVFV typing tool. (A) The web interface offers a portal for users to perform classification and visualize the results. The typing report provides information on the sequence name of the query sequence, the nucleotide length of the sequence, an illustration of the position in the virus’ genomic segment, the species assignment and the genotype assignment. A detailed report (B) is provided for the phylogenetic analysis that resulted into this classification. All results can be exported to a variety of file formats (XML, CSV, Excel or FASTA format). The detailed HTML report (C) contains information on the sequence name, length, assigned virus and genotype, an illustration (D) of the position of the sequence in the virus’ genomic segment and the phylogenetic analysis section. The alignment section shows the alignment and constructed phylogenetic tree