DCSE:Double-Channel-Siamese-Ensemble model for protein protein interaction prediction

BMC Genomics

Table 3 The performance on the 1:3 imbalanced dataset

	ACC	Pre	\(F_{1}\)	Recall	MCC
DCSE	0.9565±0.0072	0.9012±0.0123	0.9132±0.0021	0.9256±0.0241	0.8844±0.0131
DeepPPI	0.8696±0.0057	0.7293±0.0184	0.7456±0.0122	0.7639±0.0312	0.6243± 0.0408
DNN-XGB	0.9507± 0.0019	0.9194±0.0033	0.8994±0.0123	0.8803±0.0055	0.8672±0.0052
KNN	0.7825±0.0026	0.5815±0.0071	0.5185±0.0032	0.4678±0.0047	0.3838± 0.0064
XGB	0.8813±0.0016	0.8253± 0.0009	0.7379±0.0031	0.6672±0.0071	0.6686±0.0049
NB	0.3387±0.1767	0.2804±0.0602	0.4267±0.0503	0.8928± 0.2143	0.0444±0.0888
RF	0.8690±0.0014	0.9148± 0.0019	0.6675±0.0122	0.5255 ± 0.0053	0.6286± 0.0045
SSC	0.8234±0.0017	0.6419±0.0021	0.6363±0.0019	0.6440± 0.0117	0.5242± 0.0043

ISSN: 1471-2164