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Table 2 Gene composition in seven Verbascum species ‡Genes comprising two introns. †Genes with a single intron. Ψ Pseudogene. (× 2), genes duplicated in the inverted repeat regions

From: Taxonomy, comparative genomics of Mullein (Verbascum, Scrophulariaceae), with implications for the evolution of Verbascum and Lamiales

Category of Genes

Group of Genes

Name of genes

Self-replication

DNA dependent RNA polymerase

rpoA, rpoB, rpoC1†, rpoC2

Ribosomal proteins (SSU)

rps11,rps12, rps14, rps15, rps16†, rps18, rps19, rps2, rps3, rps4, rps7, rps7, rps8

Ribosomal proteins (LSU)

rpl14, rpl16†, rpl2†, rpl20, rpl22, rpl23, rpl23, rpl32, rpl33, rpl36

RNA genes

Ribosomal RNA

rrn 4.5(× 2), rrn5(× 2), rrn16(× 2), rrn23(× 2)

Transfer RNA

trnH-GUG, trnK-UUU†, trnQ-UUG, trnS-GCU, trnG-UCC, trnR-UCU, trnC-GCA, trnfM-CAU, trnD-GUC, trnY-GUA, trnE-UUC, trnT-GGU, trnS-UGA, trnG-GCC, trnG-UCC†, trnS-GGA, trnT-UGU, trnL-UAA†, trnF-GAA, trnV-UAC†, trnM-CAU, trnW-CCA, trnP-UGG, trnI-CAU(× 2), trnL-CAA(× 2), trnV-GAC(× 2), trnI-GAU† (× 2), trnR-ACG, trnL-UAG, trnN-GUU(× 2), trnR-ACG(× 2), trnA-UGC † (× 2),

Genes for photosynthesis

Subunits of ATP synthase

atpA, atpB, atpE, atpF†, atpH, atpI

Subunits of photosystem I

psaA, psaB, psaC, psaI, psaJ

Subunits of photosystem II

psbA, psbB, psbC, psbD, psbE, psbF, psbI, psbJ, psbK, psbL, psbM, psbN, psbT, psbZ

Subunits of NADH-dehydrogenase

ndhA†,, ndhB† (× 2), ndhC, ndhD, ndhE, ndhF, ndhG, ndhH, ndhI, ndhJ, ndhK

Subunits of cytochrome b/f complex

petA, petB†, petD†, petG, petL, petN

Subunit of rubisco

rbcL

Other genes

Maturase

matK

Protease

clpP‡

Subunit of Acetyl-CoA-carboxylase

accD

c-type cytochrome synthesis gene

ccsA

Envelop membrane protein

cemA

Genes of unknown function/Hypothetical protein RF

Conserved open reading frames

ycf1, ycf15 Ψ, ycf2, ycf4, ycf3‡