A composite strategy of genome-wide association study and copy number variation analysis for carcass traits in a Duroc pig population

Table 1 Chromosome distribution of all 23,856 CNVRs detected in the porcine genome (Sscrofa 11.1 reference genome assembly) by next generation sequencing data

Chr	Chr length (bp)	CNVR count	Total CNVR length (bp)	Average size (bp)	Percentage (%)
1	274330532	2187	24465457	11186.77	8.92
2	151935994	1570	15064612	9595.29	9.92
3	132848913	1347	7921458	5880.82	5.96
4	130910915	1528	9733311	6369.97	7.44
5	104526007	1163	6678547	5742.52	6.39
6	170843587	1474	10681625	7246.69	6.25
7	121844099	1405	7533446	5361.88	6.18
8	138966237	1499	16186457	10798.17	11.65
9	139512083	1462	13185580	9018.86	9.45
10	69359453	1025	6445133	6287.93	9.29
11	79169978	1245	7090443	5695.13	8.96
12	61602749	863	4177951	4841.19	6.78
13	208334590	1913	22275135	11644.09	10.69
14	141755446	1330	8144486	6123.67	5.75
15	140412725	1386	14849166	10713.68	10.58
16	79944280	992	9542775	9619.73	11.94
17	63494081	822	3493138	4249.56	5.50
18	55982971	645	3326,348	5157.13	5.94
Total	2265774640	23856	190795068	7997.78	8.42

ISSN: 1471-2164