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Fig. 5 | BMC Genomics

Fig. 5

From: A web-based database server using 43,710 public RNA-seq samples for the analysis of gene expression and alternative splicing in livestock animals

Fig. 5

Case study to analyze gene expression and alternative splicing in satellite cells of pig skeletal muscle (PSCs) by using LivestockExp. A PCA plot of overall gene expression for samples covering four group of PSCs. D-24 h and D-36 h indicate induced differentiation for 24 and 36 hours, respectively, in PSCs. DT-24 h and DT-36 h indicate the corresponding PSCs after transfected with antisense oligonucleotide of TCONS_00323213. B Hierarchical clustering based on overall gene expression. C Same samples but plotted for PCA of overall alternative splicing. D Hierarchical clustering based on alternative splicing (PSI)

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BMC Genomics

ISSN: 1471-2164

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