From: Predicting nicotine metabolism across ancestries using genotypes
Model | Tuning Grid | Method |
---|---|---|
PLS | Number of components \(\in \{1,...,20\}\) | pls |
PPR | Number of terms \(\in \{1,..,5\}\) | ppr |
Enet | Mixing percentage \(\alpha \in \{0.10,0.55,1.00\}\) | glmnet |
 | Penalty parameter \(\lambda \in \{8.975e^{-4},8.975e{^-3},8.975e^{-2}\}\) |  |
SVM-L | Cost parameter \(\in \{0.001,0.002,...,0.02\}\) | svmLinear |
SVM-R | Cost parameter \(\in \{5,...,20\}\) | svmRadialSigma |
 | RBF kernel parameter \(\sigma \in \{0.0001,0.0005,...,0.02\}\) |  |
GBM | Interaction depth \(\in \{1,...,5\}\) | gbm |
 | Number of trees \(\in \{10,20,...,100\}\) |  |
 | Shrinkage 0.1 |  |
 | Minimum number of Obs. in a node 10 |  |
RF | Number of randomly selected predictors \(\in \{1,...,10\}\) | rf |