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Table 3 Annotation of atp8 gene in Mytilidae

From: Mitochondrial genomic analyses provide new insights into the “missing” atp8 and adaptive evolution of Mytilidae

Species

Position (bp)

Size (bp)

Intergenic region (bp)a

Start codon

Stop codon

TMb

GenBank

Annotation Methodsc

Modiolus modiolus

3240–3419

180

194

ATG

TAA

7–29

KX821782

M

Modiolus kurilensis

676–861

186

191

ATG

TAA

7–29

KY242717

M

Modiolus nipponicus

3409–3636

228

304

ATG

TAA

13–35

MK721547

M

Modiolus comptus

3106–3276

171

670

ATG

TAG

13–35

MN602036

M

Modiolus philippinarum

16,113–16,304

192

209

ATG

TAA

4–26

KY705073

M

Xenostrobus securis

3119–3238

120

120

ATG

TAG

7–29

ON128254

M

Limnoperna fortunei

157–273

117

271

ATA

TAA

10–32

KP756905

M

Mytilisepta keenae

15,718–15,882

165

186

ATG

TAA

10–32

MK721542

M & HMM

Lithophaga curta

10,543–10,659

117

899

GTG

TAA

7–29

MK721546

M & HMM

Bathymodiolus puteoserpentis

3193–3324

132

241

GTG

TAG

7–29

ON128252

M & HMM

Gigantidas vrijenhoeki

3304–3435

132

157

GTG

TAA

7–29

ON128253

M & HMM

Crenomytilus grayanus

17,320–17,571

251

279

ATG

TAA

5–27

MK721543

M &HMM

Mytilaster solisianus

13,905–14,324

420

574

ATC

TAA

13–32

KM655841

M & HMM

  1. a Intergenic region used for annotation of atp8
  2. b TM Transmembrane
  3. c Annotation methods. M Manual annotation, HMM hhblits annotation