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Table 2 Top 10 over-represented biological processes enriched by up-regulated genes. The genes contributed to enrichment of each biological process are specified by italic characters

From: Gene expression profile of placentomes and clinical parameters in the cows with retained placenta

Enriched biological processes and their associated genes

Enrichment ratio

P  value

Mature B cell differentiation

CMTM7, LGALS1

52.878

0.00059822

Positive regulation of lymphocyte migration

CXCL14, ITGB3

26.439

0.0025034

T-helper 1 type immune response

IL27RA, RELB

24.884

0.0028288

Positive regulation of cell-matrix adhesion

ITGB3, NINJ1

23.502

0.0031729

Positive regulation of cell-substrate adhesion

ARL2, ITGB3, NINJ1

15.108

0.00098375

Positive regulation of leukocyte migration

CXCL14, ITGB3, THBS4

13.220

0.0014535

Positive regulation of peptidyl-tyrosine phosphorylation

THBS4, UNC119, HGF

10.755

0.0026362

Regulation of peptidyl-tyrosine phosphorylation

ITGB3, THBS4, UNC119, HGF

9.4006

0.00080833

Peptidyl-tyrosine phosphorylation

ITGB3, THBS4, UNC119, HGF

6.1756

0.0037929

Peptidyl-tyrosine modification

ITGB3, THBS4, UNC119, HGF

6.0432

0.0040986

  1. No bolded biological process shows that none of the processes had FDR < 0.05