Assisted clustering of gene expression data using regulatory data from partially overlapping sets of individuals

BMC Genomics

Table 3 Comparison of gene cluster size (number of genes) across different clustering approaches

Number of genes in cluster	1	2	3	4	5	6	7	8	9	10	11	12	13
ANCut.silh	255	127	147	133	134	221	183	124	176	117	286	169	107
ANCut.subest with K = 13	205	163	248	128	176	84	192	94	181	156	188	141	223
K-means with K = 13	323	173	102	358	148	60	39	283	101	50	254	17	271

Please note that the cluster number assignment is arbitrary. There is no 1-to-1 correspondence between the ANCut.silh clustering assignment, ANCut.subset clustering assignment, and the K-means clustering assignment

ISSN: 1471-2164