Table 9 Imputation quality under the poor imputation quality scenario with various simulation coefficient settings and fixed \(pcnt=1/3\)
Median \({R}^{2}\) (range) | \(q\) | ||||||
|---|---|---|---|---|---|---|---|
200 | 400 | 500 | 600 | 800 | 1000 | ||
\(n\) | 300 | 0.011 (3e-07, 0.21) | 0.013 (6e-08, 0.20) | 0.009 (6e-09, 0.21) | 0.008 (3e-07, 0.18) | 0.008 (2e-07, 0.18) | 0.009 (4e-09, 0.21) |
500 | 0.013 (6e-11, 0.25) | 0.011 (3e-07, 0.19) | 0.007 (1e-09, 0.22) | 0.009 (4e-08, 0.20) | 0.010 (5e-07, 0.29) | 0.007 (9e-08, 0.16) | |
1000 | 0.016 (2e-09, 0.33) | 0.009 (1e-08, 0.25) | 0.013 (5e-07, 0.25) | 0.009 (1e-07, 0.27) | 0.011 (2e-07, 0.21) | 0.007 (3e-09, 0.15) | |
1200 | 0.022 (5e-07, 0.28) | 0.014 (7e-08, 0.22) | 0.014 (2e-07, 0.21) | 0.011 (3e-10, 0.19) | 0.011 (4e-08, 0.20) | 0.012 (3e-08, 0.23) | |
1500 | 0.023 (4e-07, 0.31) | 0.019 (2e-07, 0.31) | 0.014 (2e-07, 0.25) | 0.011 (3e-08, 0.29) | 0.012 (2e-07, 0.25) | 0.008 (4e-07, 0.23) | |