From: Assessing the relative performance of fast molecular dating methods for phylogenomic data
Data reference | Label | Biological group | Data typea | Site count | Taxa count | Calibration count | Software used | Substitution modelb |
---|---|---|---|---|---|---|---|---|
Allio et al. (2020) [50] | Allio20 | Arthropoda | AA | 288,446 | 61 | 5 | PhyloBayes | JTT + F + G5 + I |
Anderson et al. (2017) [51] | Anderson17 | Annelida | AA | 16,541 | 39 | 3 | PhyloBayes | JTT + G5 + I |
Blaimer et al. (2018) [52] | Blaimer18 | Arthropoda | N | 33,874 | 155 | 7 | BEAST | GTR + G5 |
Borowiec (2019) [53] | Borowiec19 | Arthropoda | N | 44,079 | 162 | 3 | BEAST | GTR + G4 |
Chazot et al. (2019) [54] | Chazot19 | Arthropoda | N | 6260 | 994 | 22 | BEAST | GTR + G5 |
Delsuc et al. (2018) [55] | Delsuc18 | Chordata | AA | 66,593 | 63 | 11 | PhyloBayes | LG + G5c |
Delsuc et al. (2019) [56] | Delsuc19 | Chordata | N | 15,157 | 40 | 4 | PhyloBayes | GTR + G4 |
dos Reis et al. (2018) [57] | dosReis18 | Chordata | N | 61,132 | 372 | 17 | MCMCTree | GTR + G4 |
Fang et al. (2018) [58] | Fang18 | Chordata | N | 8079 | 128 | 3 | BEAST | GTR + G5 |
Feng et al. (2017) [59] | Feng17 | Chordata | N | 88,302 | 164 | 20 | MCMCTree | GTR + G5 |
Hedin et al. (2019) [60] | Hedin19 | Arthropoda | N | 71,483 | 27 | 3 | PhyloBayes | GTR + G5 |
Hughes et al. (2018) [61] | Hughes18 | Chordata | N | 10,203 | 305 | 31 | MCMCTree | HKY + G5 |
Irisarri et al. (2017) [20] | Irisarri17 | Chordata | AA | 14,043 | 100 | 14 | PhyloBayes | JTT + F + G4 + I |
Johnson et al. (2018) [62] | Johnson18 | Arthropoda | N | 131,013 | 193 | 23 | MCMCTree | GTR + G5 |
Kuntner et al. (2019) [63] | Kuntner19 | Arthropoda | N | 89,212 | 34 | 2 | MCMCTree | HKY + G5 |
Pereira et al. (2017) [64] | Pereira17 | Chordata | N | 12,354 | 294 | 22 | MCMCTree | GTR + G5 |
Pessoa-Filho et al. (2017) [65] | PessoaFilho17 | Streptophyta | N | 135,255 | 30 | 1 | BEAST | GTR + G4 |
Peters et al. (2017) [66] | Peters17 | Arthropoda | AA | 75,904 | 174 | 14 | MCMCTree | JTT |
Peters et al. (2018) [67] | Peters18 | Arthropoda | AA | 1,469,006 | 48 | 3 | MCMCTree | JTT |
Ran et al. (2018) [68] | Ran18 | Streptophyta | N | 4,246,454 | 16 | 4 | MCMCTree | GTR + G5 |
Sann et al. (2018) [69] | Sann18 | Arthropoda | N | 284,607 | 184 | 10 | MCMCTree | GTR + G4 |
Wolfe et al. (2019) [19] | Wolfe19 | Arthropoda | AA | 5994 | 95 | 19 | PhyloBayes | JTT + G4c |
Yonezawa et al. (2017) [70] | Yonezawa17 | Chordata | N | 873,274 | 45 | 6 | MCMCTree | GTR + G8 |