Genomic diversity and comprehensive taxonomical classification of 61 Bacillus subtilis group member infecting bacteriophages, and the identification of ortholog taxonomic signature genes

Abraha, Haftom Baraki; Lee, Jae-Won; Kim, Gayeong; Ferdiansyah, Mokhammad Khoiron; Ramesha, Rathnayaka Mudiyanselage; Kim, Kwang-Pyo

doi:10.1186/s12864-022-09055-w

Table 1 Sixty-one BSPs sorted according to their genome sizes

From: Genomic diversity and comprehensive taxonomical classification of 61 Bacillus subtilis group member infecting bacteriophages, and the identification of ortholog taxonomic signature genes

Genome-size	BSP	Accession No.	Length (kb)	Proteins	GC %	Subfamily	Family/Class	Genome-size	BSP	Accession No.	Length (kb)	Proteins	GC %	Subfamily	Family
Small-size	Goe1	NC_049975	18.38	24	37.49	Picovirinae	Salasmaviridae	Large-size	SP8	MW001214.1	138.74	209	40.30	Spounavirinae	Herelleviridae
	B103	NC_004165	18.63	17	37.66				SP10	NC_019487	143.99	236	40.49
	Nf	NC_049976	18.75	27	37.32				Goe2	KY368639.1	146.14	226	40.26
	Goe6	NC_049965	19.11	26	39.78				CampHawk	NC_022761	146.19	231	40.20
	BSTP4	MW354668.1	19.15	31	39.95				SIOphi	NC_042133	146.7	206	39.02	Bastillevirinae
	phi29	NC_011048	19.28	27	39.99				phi18	MZ751040.1	147.3	226	40.56	Spounavirinae
	PZA	NC_001423	19.37	27	39.66				Goe10	MT601271.1	149.54	223	40.35
	BSTP6	MW354670.1	19.37	32	39.78				Goe9	MT601270.1	150.96	225	40.36
	GA1	NC_002649	21.13	35	34.65	Tatarstanvirinae			BSP38	NC_048726	153.27	254	41.75	Bastillevirinae
	Gxv1	NC_049974	21.78	34	39.70	Picovirinae			BSTP3	MW354667	153.75	276	42.10
	Stitch	NC_031032	24.32	36	30.36	Northropvirinae			BSP10	MF422185.1	153.77	236	42.10
Medium-size	phi105	NC_004167	39.33	51	42.69		Siphoviridae		015DV002	MW419086.1	153.88	256	38.71
	Ray17	MH752385.1	43.73	74	44.55				000TH009	MW419085.1	155.19	266	38.64
	SPP1	NC_004166	44.01	97	43.72				000TH008	MW419084.1	155.25	266	38.61
	049ML003	MN176228.1	44.82	81	43.67				phiNIT1	NC_021856.1	155.63	219	42.12
	019DV004	MN176221.1	45.24	84	42.64				BSP9	MG000860.1	155.96	228	42.01
	049ML001	MN176227.1	45.24	82	43.75				Goe3	NC_048652	156.43	246	41.93
	000TH010	MN176219.1	46.28	90	43.84				015DV004	MW419087.1	156.58	270	38.58
	PM1	NC_020883	50.86	86	41.29		Myoviridae		Grass	NC_022771	156.65	252	42.25
	274BB002	MZ501264.1	52.37	81	42.51		Siphoviridae		278BB001	MZ501265.1	158.56	269	42.05
	276BB001	MN176231.1	52.37	81	42.51				Goe7	MN043730.1	158.67	251	41.84
	056SW001B	MN176230.1	52.69	83	42.55				043JT007	MZ501263.1	161.64	284	42.01
	019DV002	MN176220.1	52.75	84	42.64				010DV005	MZ501261.1	161.88	282	41.98
	268TH004	MW394467.1	52.83	82	42.45				010DV004	MZ501260.1	163.32	281	41.98
	BSTP12	MW354678.1	55.42	80	39.91		Podoviridae		035JT004	MZ501262.1	163.32	286	41.88
	BSP7	MH707430.1	55.46	70	39.92		Podoviridae	Extra-large size	SP15	NC_031245	221.91	317	38.61		Myoviridae
Large-size	Goe12	MT601273.1	124.29	174	34.80		Caudoviricetes (Siphoviridae)		AR9	NC_031039	251.04	291	27.75
	BUCT082	MZ969646.1	125.02	180	34.79				PBS1	NC_043027	252.20	311	27.71
	Goe11	MT601272.1	126.29	175	34.91				Minimum value		18.38	17	27.71
	Goe13	MT601274	126.85	179	34.79				Maximum value		252.20	317	44.55
	phi3T	KY030782	128.38	201	34.96				Average		105.23	163	39.67
	SPO1	NC_011421	132.56	204	39.96	Spounavirinae	Herelleviridae		Median		128.382	182.50	40.30
	SPbeta	NC_001884	134.42	185	34.64		Caudoviricete (Siphoviridae)

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ISSN: 1471-2164

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