Fig. 2

Global Profiling of Transcriptome and Small RNAome from Col and Cvi. a Stage-wise small RNA length distribution for Col and Cvi. Reads were counted by reads per million mapped (RPM). b Pearson correlation for transcriptome (blue color gradient) and small RNAome (red color gradient) from Col and Cvi. c Hierarchical clustering of differentially expressed 24sRCs between stages from Col/Cvi or between the same stage for Col/Cvi. Each 24sRC was defined by ShortStack and their expression levels were measured. Hierarchical clustering was conducted after standardization (Z-score)