Skip to main content

Table 1 The quantity of six SSR Motifs in five maize genomes

From: Pattern and variation in simple sequence repeat (SSR) at different genomic regions and its implications to maize evolution and breeding

 

MNR

DNR

TNR

TTR

PNR

HNR

Total

B73

74,612

41,595

16,223

3484

5259

3222

144,395

W22

63,503

43,239

15,279

3389

4861

2602

132,873

SK

78,951

41,952

16,330

3464

5334

3835

149,866

PE0075

71,105

41,531

16,874

3404

5286

3168

141,368

LT2357

81,236

43,039

18,879

3385

5311

3427

155,277

AVG

73,881

42,271

16,717

3425

5210

3251

144,756

CV (%)

9.47

1.92

8.00

1.33

3.78

13.77

5.88

  1. MNR, DNR, TNR, TTR, PNR, HNR indicate mono-, di-, tri-, tetra, penta- and hexa- nucleotide SSRs
  2. AVG Average, CV coefficient of variation
Back to article page

BMC Genomics

ISSN: 1471-2164

Contact us