Transcriptional profiling of Xanthomonas campestris pv. campestris in viable but nonculturable state

BMC Genomics

Table 1 Summary of RNA-seq data

Sample time	Sample ID^a	Raw reads	Clean Reads	Clean Bases (bp)	Q20 (%)^b	Q30 (%)^c
0 min	CK_1	31,068,304	30,962,674	4,623,897,717	98.92	96.44
	CK_2	35,955,456	35,842,100	5,355,651,336	98.92	96.44
	CK_3	23,758,872	23,681,260	3,535,242,993	98.97	96.58
1 d	C1_1	25,734,326	25,646,982	3,827,149,923	98.87	96.32
	C1_2	24,366,996	24,295,288	3,625,750,139	98.99	96.66
	C1_3	23,503,642	23,428,398	3,495,853,547	98.93	96.46
2 d	C2_1	25,391,976	25,313,122	3,778,073,309	98.87	96.26
	C2_2	26,882,156	26,789,250	3,999,859,294	98.88	96.33
	C2_3	25,579,618	25,498,868	3,806,817,290	98.89	96.34
10 d	C3_1	25,219,426	25,135,710	3,748,176,994	98.85	96.32
	C3_2	25,308,130	25,227,920	3,764,168,671	98.92	96.49
	C3_3	24,408,456	24,320,494	3,626,735,061	98.82	96.23
Total		317,177,358	316,142,066	47,187,376,274

ISSN: 1471-2164