Table 2 Genome-wide SNPs around significant peaks associated with TWC traits
GGA | Position | P value | Annotation |
|---|---|---|---|
1 | 177,937,248 | 6.64475E-08 | downstream_gene_variant |
1 | 177,937,258 | 6.9306E-08 | downstream_gene_variant |
1 | 177,937,260 | 6.9306E-08 | downstream_gene_variant |
2 | 147,631,802 | 3.1038E-09 | intron_variant |
2 | 147,631,804 | 3.1038E-09 | intron_variant |
2 | 147,631,810 | 9.27652E-09 | intron_variant |
3 | 51,450,796 | 4.22402E-08 | intergenic_region |
3 | 51,451,767 | 4.48935E-08 | intergenic_region |
4 | 48,300,318 | 2.93494E-09 | intron_variant |
10 | 19,310,152 | 6.2623E-08 | upstream_gene_variant |
10 | 19,340,259 | 5.72125E-08 | synonymous_variant |
10 | 19,395,107 | 5.02104E-09 | intron_variant |
10 | 19,415,633 | 5.72125E-08 | intron_variant |
10 | 19,464,900 | 5.02104E-09 | intron_variant |
10 | 19,467,139 | 5.02104E-09 | intron_variant |
10 | 19,625,127 | 2.33249E-08 | intron_variant |
10 | 19,678,042 | 5.02104E-09 | 3_prime_UTR_variant |
10 | 19,724,611 | 2.15673E-09 | downstream_gene_variant |
10 | 19,738,739 | 3.29392E-08 | upstream_gene_variant |
10 | 19,778,184 | 5.24318E-09 | downstream_gene_variant |
10 | 19,778,186 | 5.24318E-09 | downstream_gene_variant |
10 | 19,778,444 | 5.02104E-09 | downstream_gene_variant |
10 | 19,778,446 | 5.02104E-09 | downstream_gene_variant |
10 | 19,778,465 | 5.02104E-09 | downstream_gene_variant |
10 | 19,808,228 | 4.82353E-09 | intergenic_region |
10 | 19,896,405 | 5.24106E-08 | intergenic_region |
10 | 19,901,201 | 5.02104E-09 | upstream_gene_variant |
10 | 19,901,202 | 5.02104E-09 | upstream_gene_variant |
10 | 19,902,029 | 2.40228E-08 | upstream_gene_variant |
10 | 19,902,397 | 4.53119E-09 | intron_variant |
10 | 19,907,414 | 2.27357E-09 | downstream_gene_variant |
10 | 19,907,423 | 2.27357E-09 | downstream_gene_variant |
10 | 19,908,327 | 8.70184E-09 | downstream_gene_variant |
10 | 19,923,316 | 2.03134E-09 | intron_variant |
13 | 15,861,318 | 4.113E-08 | intron_variant |
13 | 15,932,860 | 5.24339E-08 | upstream_gene_variant |
13 | 15,957,569 | 8.25751E-08 | 5_prime_UTR_variant |
13 | 15,957,593 | 3.95242E-08 | 5_prime_UTR_premature_start_codon_gain_variant |
13 | 15,957,601 | 4.113E-08 | 5_prime_UTR_premature_start_codon_gain_variant |
13 | 15,957,711 | 4.25616E-08 | upstream_gene_variant |
13 | 15,957,727 | 4.113E-08 | upstream_gene_variant |
13 | 15,967,345 | 4.113E-08 | intron_variant |
13 | 16,509,483 | 8.73341E-09 | intron_variant |
13 | 16,516,890 | 8.80698E-09 | intron_variant |
15 | 10,768,769 | 8.24974E-08 | intergenic_region |
30 | 1,560,442 | 1.76791E-08 | intergenic_region |
33 | 902,132 | 6.72479E-09 | intron_variant |
33 | 902,135 | 6.72479E-09 | intron_variant |