Table 3 Best BLASTx hits for 27 DEGs selected by a RNA-Seq analysis
From: Identification of candidate genes responsible for chasmogamy in wheat
Gene symbol | Stage | Protein function | NCBI accession |
|---|---|---|---|
Auxin responsive | |||
TraesCS5B02G341800 | GAS/YAS | Auxin responsive SAUR36-like | XM_044534055.1 |
TraesCS5B02G343000 | GAS/YAS | Auxin responsive SAUR36-like | XM_020315849.3 |
TraesCS5B02G343600 | GAS/YAS | Auxin responsive SAUR36-like | XM_037587073.1 |
TraesCS5B02G343700 | YAS | Auxin responsive SAUR36-like | XM_045229117.1 |
TraesCS5B02G344400 | GAS | Auxin responsive SAUR36-like | XM_044534070.1 |
TraesCS5B02G344500 | GAS | Auxin responsive SAUR36-like | XM_045128340.1 |
TraesCS5B02G345500 | GAS/YAS | Auxin responsive SAUR36-like | XM_044537684.1 |
TraesCS5B02G346000 | GAS/YAS | Auxin responsive SAUR36-like | XM_044537687.1 |
TraesCS5B02G346700 | GAS | Auxin responsive SAUR36-like | XM_044534083.1 |
TraesCS7A02G391100 | GAS | ABC transporter G family member 44-like | XM_044567717.1 |
Stress related | |||
TraesCS2B02G018500 | GAS | putative disease resistance protein RGA3 isoform X1, X2 | XM_044465387.1 |
TraesCS2B02G082100 | GAS/YAS | probable LRR receptor-like serine/threonine-protein kinase At3g47570 | XM_044465869.1 |
TraesCS2B02G488700 | GAS | yellow rust resistance protein 5a | MN273772.1 |
TraesCS2D02G066200 | GAS | probable LRR receptor-like serine/threonine-protein kinase At3g47570 | XM_044474111.1 |
TraesCS5B02G339200 | GAS | rop guanine nucleotide exchange factor 1-like (floral organ development) | XM_037587057.1 |
TraesCS7A02G211600 | GAS | subtilisin-like protease SBT1.8 | XM_044569899.1 |
TraesCS7D02G460300 | YAS | inorganic pyrophosphatase 2-like (salt stress) | XM_044584582.1 |
Mitosis | |||
TraesCS2B02G483800 | GAS | desmethyl-deoxy-podophyllotoxin synthase-like | XM_044464621.1 |
TraesCS2D02G462400 | GAS | desmethyl-deoxy-podophyllotoxin synthase-like | XM_044472898.1 |
TraesCS2D02G462600 | GAS | desmethyl-deoxy-podophyllotoxin synthase-like | XM_044472899.1 |
TraesCS6B02G249300 | GAS/YAS | enhancer of rudimentary homolog isoform X1 | XM_044557205.1 |
Flower development | |||
TraesCS4D02G010500 | GAS | signal peptide peptidase-like 4 | XM_037598858.1 |
TraesCS5B02G334700 | GAS/YAS | aspartyl protease family protein At5g10770-like (gluten associated) | XM_044534001.1 |
TraesCS7A02G405600 | GAS | aspartyl protease family protein At5g10770-like (gliadin hydrolysis) | XM_044567918.1 |
TraesCS7B02G305000 | GAS | aspartyl protease family protein At5g10770-like | XM_044575753.1 |
Unknown | |||
TraesCS2A02G141500 | GAS | hypothetical protein CFC21_015763 | XM_044474837.1 |
TraesCS2D02G145000 | GAS | uncharacterized protein | XM_044474839.1 |