Table 1 Summary of assembling and functional annotation of L. luymesi transcriptome

De novo assembly by Trinity

 Total base (bp)

68,590,831

 Total number of transcripts

79,464

 Number of unigenes

49,254

 Mean length of transcripts (bp)

1,047

 N50 (bp)

1,906

 Transcripts size range (bp)

200–13,725

Functional annotation

 Total number of Unigenes annotated by public databases

49,254

 NCBI non-redundant (nr) database (e-value < 1e-5)

16,887

 SwissProt (e-value < 1e-5)

13,654

 PFAM

15,753

 Gene Ontology

16,254

 KOG

9,211

Coding sequence prediction

 CDS predicted from BLAST results

17,055

 CDS predicted by ESTScan

13,726

 Total CDS predicted

30,781

 Mean length of CDS (aa)

196