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Fig. 3 | BMC Genomics

Fig. 3

From: De novo full-length transcriptome analysis of two ecotypes of Phragmites australis (swamp reed and dune reed) provides new insights into the transcriptomic complexity of dune reed and its long-term adaptation to desert environments

Fig. 3

Identification and analysis of expressed sequence tag-SSR (EST-SSR) and alternative splicing (AS) events in the full-length transcriptome. A, B Distribution of Dinucleotide and Trinucleotide repeat sequence types in All UniTransModels. The different coloured sectors indicate the percentage of different EST-SSR types. C Distribution of the number of different repetitive motifs of EST-SSR in the P. australis. D Statistics of SSRs with different repeat sequence motif lengths. E, F Pie charts show the percentage of different alternative splicing types in SR and DR, respectively. The different colors of the sectors indicate the percentage of different alternative splice types. G Histogram showing Unigenes with different numbers of isoforms in SR vs DR. H Alternative splicing pattern diagram. The constitutive exon is represented by a blue block and the alternatively spliced exon is represented by a brown block

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BMC Genomics

ISSN: 1471-2164

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