Comparative transcriptome analysis of juniper branches infected by Gymnosporangium spp. highlights their different infection strategies associated with cytokinins

Table 1 Statistics of the RNA-Seq data

Samples	Raw reads	Clean reads	Q20(%)	Q30(%)	Mapping rate(%)
0_GA_J1	49,911,292	48,543,120	98.94	96.35	88.26
0_GA_J2	48,485,060	45,621,494	98.87	96.28	91.77
0_GA_J3	45,523,254	43,857,380	98.92	96.36	91.83
III_GA_J1	54,970,928	53,971,414	98.95	96.46	67.33
III_GA_J2	62,246,294	61,151,994	98.92	96.35	57.30
III_GA_J3	53,866,148	52,939,378	98.93	96.38	62.02
0_GY_J1	41,550,906	40,712,410	98.93	96.31	89.46
0_GY_J2	42,820,094	41,922,276	98.87	96.18	83.41
0_GY_J3	41,353,966	39,997,302	98.93	96.41	88.76
I_GY_J1	53,282,226	52,521,780	98.98	96.50	77.90
I_GY_J2	56,632,488	54,706,312	98.86	96.22	72.28
I_GY_J3	58,615,702	57,415,912	98.87	96.20	75.86
II_GY_J1	42,195,356	40,317,148	98.34	94.85	76.92
II_GY_J2	39,491,260	38,203,854	98.49	95.23	75.52
II_GY_J3	46,570,360	44,720,378	98.49	95.24	73.50
III_GY_J1	43,300,734	40,396,978	98.44	95.33	27.18
III_GY_J2	44,409,450	43,091,794	98.49	95.18	76.29
III_GY_J3	58,332,954	54,177,048	98.49	95.58	66.47

ISSN: 1471-2164