Genome-wide analysis of circular RNA-mediated ceRNA regulation in porcine skeletal muscle development

BMC Genomics

Table 1 Overview of RNA-seq results for each sample

Sample name	Raw reads	Clean reads	Raw_bases (G)	Clean_bases (G)	Error rate (%)	Q20 (%)	Q30 (%)
JFW_1d_1	92,655,706	91,942,766	13.9	13.79	0.02	98.62	95.72
JFW_1d_2	107,050,232	106,444,968	16.06	15.97	0.02	98.64	95.78
JFW_1d_3	104,392,040	103,814,406	15.66	15.57	0.02	98.58	95.45
JFW_90d_1	96,202,328	95,550,798	14.43	14.33	0.03	98.08	94.2
JFW_90d_2	106,311,518	105,563,842	15.95	15.83	0.02	98.56	95.75
JFW_90d_3	95,622,436	94,984,938	14.34	14.25	0.02	98.67	95.89
JFW_180d_1	94,853,354	94,375,978	14.23	14.16	0.03	97.81	93.78
JFW_180d_2	104,189,042	103,407,232	15.63	15.51	0.02	98.59	95.54
JFW_180d_3	107,380,946	106,567,824	16.11	15.99	0.02	98.40	95.04
average	100,961,956	100,294,750	15.15	15.04	0.02	98.44	95.24

ISSN: 1471-2164