Effects of differentially expressed microRNAs induced by rootstocks and silicon on improving chilling tolerance of cucumber seedlings (Cucumis sativus L.)

Table 3 Categorization of small RNAs in CC, TC, TS, TH and TY libraries

Category	CC	TC	TS	TH	TY
Clean reads	13,258,990	12,315,436	12,722,672	14,607,618	14,377,447
Map to cucumber genome	9,547,918	8,366,100	10,000,041	10,628,208	9,993,536
Rfam^a	5,047,596	4,339,259	5,855,676	5,093,037	4,231,038
Repeat	116,550	95,787	96,759	145,595	149,364
Exon	160,519	137,121	142,915	188,053	171,930
miRBase	548,451	452,785	762,301	735,048	679,968
Unannotated	3,275,890	2,839,006	2,712,306	3,915,178	4,217,851

ISSN: 1471-2164