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Table 1 Comparison of CPPVec (Human-Model), CPPred, CPAT, CPC2, and PLEK on Human-Testing

From: CPPVec: an accurate coding potential predictor based on a distributed representation of protein sequence

Method

SP(%)

SN(%)

PRE(%)

ACC(%)

F-score

AUC

MCC

PLEK

98.10

95.42

98.11

96.73

0.967

0.993

0.935

CPC2

95.30

90.92

95.26

93.07

0.930

0.982

0.862

CPAT

94.07

94.58

94.30

94.33

0.944

0.984

0.887

CPPred

97.04

95.44

97.10

96.23

0.963

0.992

0.925

CPPVec

98.69

96.67

98.71

97.65

0.977

0.997

0.953

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BMC Genomics

ISSN: 1471-2164

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