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Fig. 6 | BMC Genomics

Fig. 6

From: scMEB: a fast and clustering-independent method for detecting differentially expressed genes in single-cell RNA-seq data

Fig. 6

The clustering results of HVGs and DEGs detected by each method in a human (hESC data) dataset. A-G The t-SNE plots generated from hESC data using A HVGs as well as DEGs detected by B Haystack, C Haystack.adv, D Haystack.tsne, E Haystack.tsne.adv, F scMEB, and G MarcoPolo. The cells in the left panel are colored by predefined labels, and the cells in the right panel are colored by predicted labels. (H) Bar plots of comparison between clustering and predefined cell class labels using four clustering metrics. The red dashed line is the average value of scMEB for each metric

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BMC Genomics

ISSN: 1471-2164

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