Table 8 SNVs Chimeras found on Merlot-hap-CF

L1

chr01

622,811

G/T

16/7

G

22

G

3

G

6

G

64

G

59

No

L1

chr01

10,384,263

G/A

28/9

G

31

G

28

G

23

G

60

G

52

Gene

L1

chr02

7,380,049

T/C

22/6

T

23

T

14

T

19

T

63

T

43

CDS

L1

chr04

23,822,006

C/G

20/8

C

19

C

21

C

32

C

67

C

48

Gene

L1

chr04

25,819,229

A/G

12/5

A

26

A

29

A

43

A

57

A

65

No

L1

chr05

22,934,305

C/T

22/7

C

21

C

16

C

30

C

56

C

25

Gene

L1

chr05

23,010,268

A/G

7/31

A

33

A

29

A

19

A

71

A

45

No

L1

chr05

25,416,770

C/T

15/5

C

19

C

22

C

25

C

48

C

57

No

L1

chr06

3,621,220

T/C

10/8

T

32

T

2

T

4

T

64

T

65

No

L1

chr06

12,834,474

A/G

20/10

A

16

A

25

A

19

A

59

A

56

No

L1

chr07

8,599,845

C/T

22/8

C

30

C

26

C

33

C

65

C

44

Gene

L1

chr07

12,188,378

A/G

23/8

A

29

A

29

A

33

A

46

A

44

No

L1

chr08

20,988,006

C/T

17/11

C

29

C

24

C

35

C

65

C

43

CDS

L1

chr08

22,606,874

T/C

18/5

T

37

T

14

T

9

T

64

T

31

No

L1

chr10

16,298,623

A/G

22/13

A

30

A

21

A

28

A

54

A

51

Gene

L1

chr11

7,012,825

G/A

23/10

G

30

G

30

G

26

G

46

G

53

Gene

L1

chr12

8,907,103

C/A

17/8

C

23

C

23

C

17

C

22

C

28

CDS

L1

chr12

16,700,578

A/G

27/14

A

37

A

17

A

16

A

52

A

35

Gene

L1

chr13

1,078,880

A/G

22/10

A

29

A

22

A

25

A

67

A

53

No

L1

chr13

19,791,949

A/T

25/8

A

28

A

22

A

29

A

61

A

48

No

L1

chr13

23,444,751

A/T

23/9

A

30

A

28

A

29

A

71

A

63

Gene

L1

chr14

2,105,195

A/C

24/7

A

25

A

17

A

23

A

64

A

52

No

L1

chr14

8,620,581

T/C

24/7

T

24

T

21

T

21

T

53

T

42

Gene

L1

chr14

15,844,322

C/T

19/7

C

12

C

27

C

28

C

33

C

45

No

L1

chr15

19,297,087

C/T

27/8

C

33

C

26

C

33

C

53

C

53

CDS

L1

chr15

20,162,161

G/A

23/11

G

31

G

20

G

35

G

45

G

70

CDS

L1

chr15

20,298,163

C/A

16/8

C

22

C

16

C

24

C

43

C

38

Gene

L1

chr16

18,511,980

T/A

19/9

T

35

T

23

T

32

T

57

T

59

No

L1

chr17

8,087,306

C/A

14/7

C

23

C

13

C

15

C

35

C

47

No

L1

chr17

9,516,464

C/G

18/8

C

32

C

27

C

16

C

75

C

66

Gene

L1

chr17

12,223,344

A/C

18/10

A

32

A

9

A

2

A

37

A

22

Gene

L1

chr18

4,105,052

T/C

16/6

T

24

T

29

T

29

T

64

T

43

Gene

L1

chr18

5,367,698

C/A

23/6

C

34

C

33

C

41

C

79

C

63

Gene

L1

chr18

11,379,480

G/T

22/9

G

37

G

27

G

26

G

58

G

30

Gene

L1

chr18

12,312,986

C/A

12/4

C

27

C

26

C

32

C

73

C

26

No

L1

chr18

21,684,668

G/A

32/10

G

27

G

4

G

7

G

50

G

27

No

L1

chr19

6,420,354

C/T

9/7

C

22

C

34

C

30

C

55

C

66

CDS

L2

chr04

26,224,776

T/C

21/7

T

34

C

28

C

29

C

73

C

56

No

L2

chr05

24,987,737

C/T

22/11

C

31

T

26

T

28

T

70

T

61

No

L2

chr06

17,243,628

T/A

20/10

T

44

A

20

A

38

A

94

A

58

No

L2

chr07

10,337,296

G/A

11/5

G

22

A

26

A

31

A

58

A

53

No

L2

chr10

8,445,101

T/A

17/12

T

24

A

26

A

30

A

72

A

47

Gene

L2

chr11

9,424,215

A/G

19/8

A

27

G

28

G

30

G

62

G

57

Gene

L2

chr12

22,268,147

A/T

22/9

A

21

T

11

T

12

T

46

T

27

CDS

L2

chr14

3,806,097

T/C

9/6

T

30

C

21

C

28

C

35

C

29

No

L2

chr15

13,526,354

A/G

23/8

A

29

G

26

G

35

G

49

G

60

CDS

L2

chr17

3,559,600

C/T

20/10

C

32

T

16

T

23

T

56

T

49

Gene

L2

chr17

7,610,259

C/T

15/5

C

24

T

30

T

27

T

64

T

46

Gene

L2

chr18

12,292,200

G/A

19/8

G

35

A

28

A

35

A

64

A

77

No

L2

chr19

468,364

G/T

25/10

G

32

T

32

T

29

T

74

T

66

CDS

L2

chr19

17,464,909

A/G

19/6

A

21

G

10

G

4

G

23

G

15

No