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Table 1 Summary of the strand-specific cDNA libraries sequencing in whole transcriptome

From: Non-coding RNAs identification and regulatory networks in pathogen-host interaction in the microsporidia congenital infection

Samples

Total reads

Unique Mapped (B. mori)

Unique_Mapped (N. bombycis)

Reads ratio (parasite/host)

Q30

NI-E5-1

140058926

10883736(77.71%)

52644 (0.04%)

0.05%

97.83%

NI-E5-2

132179004

105171708(79.57%)

42462 (0.03%)

0.04%

97.78%

NI-E5-3

154367904

123593975(80.06%)

50727 (0.03%)

0.04%

97.79%

I-E5-1

134841582

102893581 (76.31%)

2379283 (1.76%)

2.31%

97.84%

I-E5-2

128693762

97181765 (75.51%)

1991059 (1.55%)

2.05%

97.86%

I-E5-3

184873794

137942661 (74.61%)

2966177 (1.60%)

2.15%

97.94%

NI-L1-1

133407530

110497135 (82.83%)

42325 (0.03%)

0.04%

97.84%

NI-L1-2

166036466

137202200 (82.63%)

43398 (0.03%)

0.03%

98.10%

NI-L1-3

154418918

126570961 (81.97%)

41816 (0.03%)

0.03%

97.8%

I-L1-1

116250514

89236733 (76.76%)

3438194 (2.96%)

3.85%

97.85%

I-L1-2

159468356

120839202 (75.78%)

4225884 (2.65%)

3.50%

97.88%

I-L1-3

139668848

107348301 (76.86%)

4135813 (2.96%)

3.85%

97.80%

NI-L5-1

133719228

108935406 (81.47%)

27207 (0.02%)

0.02%

98.13%

NI-L5-2

184218162

150306946 (81.59%)

74902 (0.04%)

0.05%

98.10%

NI-L5-3

134570248

110797829 (82.33%)

21183 (0.02%)

0.02%

98.12%

I-L5-1

122534234

89108792 (72.72%)

6935455 (5.66%)

7.78%

97.78%

I-L5-2

187390432

136464116 (72.82%)

12951556(6.91%)

9.49%

98.02%

I-L5-3

152617240

112612509 (73.79%)

7110884 (4.66%)

6.31%

98.05%

NI-L10-1

153990740

117009774 (75.98%)

44195 (0.03%)

0.04%

97.94%

NI-L10-2

146599288

111144277 (75.82%)

82669 (0.06%)

0.07%

98.07%

NI-L10-3

127527200

96669928 (75.80%)

19775 (0.02%)

0.02%

97.87%

I-L10-1

141422932

104326489 (73.77%)

4265627 (3.02%)

4.09%

98.01%

I-L10-2

129004988

91673388 (71.06%)

4373382 (3.39%)

4.77%

97.97%

I-L10-3

132129234

91628241 (69.35%)

8727149 (6.61%)

9.52%

97.94%

  1. Three replicates were applied at all of time points of uninfected and infected samples. Total reads refer total clean reads including host and parasite. Mapped reads refer reads can be mapped to N. bombycis or silkworm genome. Reads ratio refers N. bombycis reads divide silkworm reads