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Table 2 Summary of the small RNA libraries sequencing in whole transcriptome

From: Non-coding RNAs identification and regulatory networks in pathogen-host interaction in the microsporidia congenital infection

Samples

Total tags

Mapped tags (B. mori)

Mapped tags (N. bombycis)

Tags ratio(parasite/host)

NI-E5-1

1809583

12131745 (87.85%)

26827 (0.19%)

0.22%

NI-E5-2

10584907

9126448 (86.22%)

13871 (0.13%)

0.15%

NI-E5-3

12086145

10477844 (86.69%)

20727 (0.17%)

0.20%

I-E5-1

12839414

5609336 (43.69%)

4761066 (37.08%)

84.88%

I-E5-2

14159566

6368998 (44.98%)

5222428 (36.88%)

82.00%

I-E5-3

11837155

5041904 (42.59%)

4596470 (38.83%)

91.17%

NI-L1-1

9772396

7980968 (81.67%)

47510 (0.49%)

0.60%

NI-L1-2

13683260

10622680 (77.63%)

220540 (1.61%)

2.08%

NI-L1-3

11701558

9036998 (77.23%)

38081 (0.33%)

0.42%

I-L1-1

9754743

4429750 (45.41%)

2322325 (23.81%)

52.43%

I-L1-2

10607820

4807451 (45.32%)

2441992 (23.02%)

50.80%

I-L1-2

8831025

3462318 (39.21%)

2946789 (33.37%)

85.11%

NI-L5-1

12135683

3305586 (27.24%)

47474 (0.39%)

1.44%

NI-L5-2

13179834

3008785 (22.83%)

78851 (0.60%)

2.62%

NI-L5-3

12799412

2660845 (20.79%)

44164 (0.35%)

1.66%

I-L5-1

12614602

1500769 (11.90%)

7079881 (56.12%)

471.75%

I-L5-2

10053638

1014524 (10.09%)

5340257 (53.12%)

526.38%

I-L5-3

9822926

1031901 (10.51%)

5572322 (56.73%)

540.01%

NI-L10-1

10841051

1938008 (17.88%)

118100 (1.09%)

6.09%

NI-L10-2

11767281

2367569 (20.12%)

104389 (0.89%)

4.41%

NI-L10-3

9174235

1781290 (19.42%)

34160 (0.37%)

1.92%

I-L10-1

14633132

932937 (6.38%)

7828950 (53.50%)

839.17%

I-L10-2

10841706

742098 (6.84%)

5849551 (53.95%)

788.25%

I-L10-3

11269705

1322587 (11.74%)

6244127 (55.41%)

472.11%

  1. Three replicates were applied at all of time points of uninfected and infected samples. Total tags refer total clean tags including host and parasite. Mapped tags refer tags can be mapped to N. bombycis or silkworm genome. Tags ratio refers N. bombycis tags divide silkworm tags