Fig. 3

Data visualization of the CanISO web pages. (a) Table showing the presence or absence of the transcriptome and/or SNP data for each sample. An open circle indicates the existence of the corresponding data. Users can move to the detailed sample data page for a selected sample by clicking the “view” button. (b) Comparison of gene/transcript-level expression (top and middle) and transcript structures (bottom) of the TGFB1 gene between normal and tumor conditions. In the middle figure, NA means “not applicable” due to the absence of the corresponding isoforms in each condition. (c) Search results of germline SNPs for the FGF5 gene. Users can click the “view” button to view the genome browser page showing the frequencies of the selected and neighboring SNPs