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Fig. 6 | BMC Genomics

Fig. 6

From: CRISPR/Cas9-based depletion of 16S ribosomal RNA improves library complexity of single-cell RNA-sequencing in planarians

Fig. 6

DASH treatment benefits clustering and differential expression analysis. A, B UMAP plots of untreated (A) and DASHed (B) samples. Each dot represents a single cell. Dots are color-coded by clusters. C Dot plots of marker gene expression across annotated clusters. The size of the dots represents the percentages of cells within each cluster that express the marker gene. The color gradient represents the expression level. Red box shows the cluster unique to the DASHed dataset. D Violin plot showing the percentage of 16S UMIs in each cluster, where C13 has the highest (red box). Each dot represents a single cell

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BMC Genomics

ISSN: 1471-2164

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